Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase-exonuclease addab subunit addb | DXA34_22315 | Not Available | Positive | 4763207 - 4766734 | 134442.0 |
| helicase-exonuclease addab subunit adda | DXA34_22320 | Not Available | Positive | 4766694 - 4770362 | 139915.0 |
| lysr family transcriptional regulator | DXA34_22325 | Not Available | Negative | 4770529 - 4771467 | 35437.3 |
| gtra family protein | DXA34_22335 | Not Available | Positive | 4772044 - 4772481 | 16693.6 |
| hypothetical protein | DXA34_22340 | Not Available | Positive | 4772565 - 4775666 | 116111.0 |
| adenine phosphoribosyltransferase | DXA34_22345 | Not Available | Positive | 4775695 - 4776219 | 19217.5 |
| hypothetical protein | DXA34_22350 | Not Available | Positive | 4776236 - 4776418 | 6029.0 |
| d-2-hydroxyacid dehydrogenase | DXA34_22355 | Not Available | Positive | 4776438 - 4777406 | 35345.7 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DXA34_22360 | Not Available | Positive | 4777708 - 4779993 | 86412.1 |
| mbl fold metallo-hydrolase | DXA34_22365 | Not Available | Positive | 4780169 - 4780813 | 23670.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
