Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | DXA34_22265 | Not Available | Negative | 4749852 - 4751147 | 51191.8 |
| hypothetical protein | DXA34_22270 | Not Available | Positive | 4751904 - 4752656 | 27748.4 |
| gamma-glutamyltransferase | DXA34_22275 | Not Available | Negative | 4753166 - 4754983 | 65149.0 |
| succinylglutamate desuccinylase | DXA34_22280 | Not Available | Negative | 4755082 - 4756227 | 41016.3 |
| trap transporter large permease | DXA34_22285 | Not Available | Negative | 4756403 - 4757680 | 45164.4 |
| hypothetical protein | DXA34_22290 | Not Available | Negative | 4757699 - 4758337 | 21489.9 |
| response regulator | DXA34_22295 | Not Available | Negative | 4758511 - 4759140 | 23836.9 |
| sensor histidine kinase | DXA34_22300 | Not Available | Negative | 4759121 - 4760581 | 55282.8 |
| duf1292 domain-containing protein | DXA34_22305 | Not Available | Positive | 4761047 - 4761391 | 13174.7 |
| rna polymerase sigma-54 factor | DXA34_22310 | Not Available | Positive | 4761572 - 4762993 | 54159.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
