Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | DXA34_01755 | Not Available | Positive | 351565 - 352383 | 30281.2 |
| acylphosphatase | DXA34_01760 | Not Available | Positive | 352385 - 352657 | 10578.8 |
| ai-2e family transporter | DXA34_01765 | Not Available | Positive | 352891 - 354003 | 41617.5 |
| alpha/beta fold hydrolase | DXA34_01770 | Not Available | Positive | 354098 - 355567 | 55501.3 |
| merr family transcriptional regulator | DXA34_01780 | Not Available | Negative | 355975 - 356799 | 32611.6 |
| mate family efflux transporter | DXA34_01785 | Not Available | Positive | 356872 - 358212 | 49114.3 |
| hypothetical protein | DXA34_01790 | Not Available | Negative | 358272 - 358610 | 12974.8 |
| sdr family oxidoreductase | DXA34_01795 | Not Available | Negative | 358653 - 359426 | 27415.9 |
| coa transferase | DXA34_01800 | Not Available | Negative | 359652 - 360857 | 44460.5 |
| methylmalonyl-coa carboxyltransferase | DXA34_01805 | Not Available | Negative | 360914 - 362470 | 56687.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
