Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpr(ser) kinase/phosphatase | DXA34_21880 | Not Available | Negative | 4672844 - 4673770 | 34905.4 |
| excinuclease abc subunit uvrc | DXA34_21885 | Not Available | Negative | 4673875 - 4675752 | 72079.7 |
| duf1653 domain-containing protein | DXA34_21890 | Not Available | Negative | 4675757 - 4676341 | 22308.5 |
| sugar fermentation stimulation protein | DXA34_21895 | Not Available | Negative | 4676338 - 4677570 | 45930.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DXA34_21900 | Not Available | Negative | 4677570 - 4678067 | 18417.3 |
| parb/repb/spo0j family partition protein | DXA34_21910 | Not Available | Positive | 4678805 - 4680259 | 52578.8 |
| hypothetical protein | DXA34_21915 | Not Available | Positive | 4680578 - 4680919 | 12294.0 |
| antirestriction protein arda | DXA34_21920 | Not Available | Positive | 4680919 - 4681623 | 26697.9 |
| pcfb family protein | DXA34_21925 | Not Available | Positive | 4681756 - 4682151 | 15078.2 |
| type iv secretory system conjugative dna transfer family protein | DXA34_21930 | Not Available | Positive | 4682138 - 4683976 | 69000.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
