Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DXA34_21770 | Not Available | Positive | 4649688 - 4650545 | 32628.4 |
| hypothetical protein | DXA34_21775 | Not Available | Positive | 4650542 - 4650730 | 6743.06 |
| duf4368 domain-containing protein | DXA34_21780 | Not Available | Positive | 4650842 - 4652452 | 61932.5 |
| spoiid/lytb domain-containing protein | DXA34_21785 | Not Available | Negative | 4652633 - 4654891 | 84228.2 |
| ai-2e family transporter | DXA34_21790 | Not Available | Negative | 4654948 - 4656192 | 46257.3 |
| hypothetical protein | DXA34_21795 | Not Available | Negative | 4656923 - 4657333 | 15760.8 |
| thymidine phosphorylase | DXA34_21805 | Not Available | Negative | 4657799 - 4659124 | 46924.7 |
| cytidine deaminase | DXA34_21810 | Not Available | Negative | 4659152 - 4659637 | 17474.6 |
| hypothetical protein | DXA34_21815 | Not Available | Negative | 4659615 - 4660703 | 38258.0 |
| deoxyribose-phosphate aldolase | DXA34_21820 | Not Available | Negative | 4660860 - 4661513 | 23597.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
