Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetracycline efflux mfs transporter tet(40) | DXA34_21710 | Not Available | Negative | 4639797 - 4641017 | 43899.1 |
| tetracycline resistance ribosomal protection protein tet(32) | DXA34_21715 | Not Available | Negative | 4641304 - 4643223 | 72249.2 |
| xre family transcriptional regulator | DXA34_21725 | Not Available | Positive | 4643732 - 4644187 | 16957.7 |
| class i sam-dependent methyltransferase | DXA34_21730 | Not Available | Positive | 4644401 - 4645168 | 29518.5 |
| sigma-70 family rna polymerase sigma factor | DXA34_21735 | Not Available | Positive | 4645373 - 4645819 | 17521.8 |
| helix-turn-helix domain-containing protein | DXA34_21740 | Not Available | Positive | 4645809 - 4646012 | 7812.34 |
| plasmid mobilization relaxosome protein mobc | DXA34_21745 | Not Available | Positive | 4646569 - 4646967 | 14676.6 |
| relaxase | DXA34_21750 | Not Available | Positive | 4646939 - 4648561 | 61808.1 |
| hypothetical protein | DXA34_21760 | Not Available | Positive | 4648746 - 4648958 | 8505.39 |
| replication protein | DXA34_21765 | Not Available | Positive | 4648948 - 4649691 | 28046.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
