Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DXA34_21650 | Not Available | Positive | 4625575 - 4626279 | 25448.2 |
| sam-dependent methyltransferase | DXA34_21660 | Not Available | Positive | 4626960 - 4627829 | 32571.7 |
| acyltransferase | DXA34_21665 | Not Available | Negative | 4627855 - 4628916 | 39298.2 |
| peptidase s8 | DXA34_21670 | Not Available | Negative | 4628940 - 4630259 | 46384.4 |
| alpha-amylase | DXA34_21675 | Not Available | Negative | 4630256 - 4632145 | 72047.2 |
| abc transporter atp-binding protein | DXA34_21680 | Not Available | Negative | 4632211 - 4634031 | 68886.1 |
| exodeoxyribonuclease iii | DXA34_21685 | Not Available | Negative | 4634167 - 4634922 | 29274.6 |
| dicarboxylate/amino acid:cation symporter | DXA34_21690 | Not Available | Negative | 4635145 - 4636338 | 42050.3 |
| transglutaminase domain-containing protein | DXA34_21700 | Not Available | Positive | 4637452 - 4638345 | 32532.4 |
| type ii secretion system f family protein | DXA34_21705 | Not Available | Positive | 4638364 - 4639416 | 37839.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
