Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_21390 | Not Available | Positive | 4557903 - 4559552 | 62352.3 |
| polysaccharide biosynthesis protein | DXA34_21395 | Not Available | Positive | 4559578 - 4561431 | 69650.5 |
| site-specific integrase | DXA34_21400 | Not Available | Positive | 4561789 - 4562742 | 36326.4 |
| chain-length determining protein | DXA34_21405 | Not Available | Positive | 4562868 - 4564262 | 51803.6 |
| teichuronopeptide | DXA34_21410 | Not Available | Negative | 4564700 - 4565104 | 15690.7 |
| cell wall-binding protein | DXA34_21415 | Not Available | Negative | 4565432 - 4566799 | 51537.0 |
| 3-hydroxy-3-methylglutaryl-coa lyase | DXA34_21420 | Not Available | Negative | 4567073 - 4568680 | 61205.2 |
| had family hydrolase | DXA34_21425 | Not Available | Negative | 4568692 - 4569405 | 26282.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DXA34_21430 | Not Available | Negative | 4569417 - 4570187 | 28384.8 |
| thiamine pyrophosphate-binding protein | DXA34_21435 | Not Available | Positive | 4570570 - 4572501 | 69974.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
