Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DXA34_21335 | Not Available | Negative | 4548181 - 4548540 | 13744.3 |
| tetr/acrr family transcriptional regulator | DXA34_21340 | Not Available | Positive | 4548716 - 4549366 | 24288.2 |
| mfs transporter | DXA34_21345 | Not Available | Positive | 4549462 - 4550700 | 44691.8 |
| sigma-70 family rna polymerase sigma factor | DXA34_21350 | Not Available | Positive | 4551180 - 4551590 | 16085.1 |
| hypothetical protein | DXA34_21355 | Not Available | Positive | 4551936 - 4552139 | 7644.97 |
| hypothetical protein | DXA34_21360 | Not Available | Positive | 4552268 - 4552534 | 10013.1 |
| duf4368 domain-containing protein | DXA34_21365 | Not Available | Positive | 4552651 - 4554348 | 64877.3 |
| hypothetical protein | DXA34_21375 | Not Available | Positive | 4554845 - 4555028 | 6898.33 |
| glucan-binding protein | DXA34_21380 | Not Available | Negative | 4555025 - 4556581 | 58623.8 |
| duf305 domain-containing protein | DXA34_21385 | Not Available | Positive | 4556883 - 4557524 | 24669.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
