Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf521 domain-containing protein | DXA34_21180 | Not Available | Negative | 4518156 - 4519364 | 44580.7 |
| duf2088 domain-containing protein | DXA34_21185 | Not Available | Negative | 4519424 - 4520686 | 46633.0 |
| hypothetical protein | DXA34_21190 | Not Available | Negative | 4520813 - 4520995 | 6688.36 |
| ll-diaminopimelate aminotransferase | DXA34_21195 | Not Available | Negative | 4520985 - 4522169 | 43695.0 |
| hypothetical protein | DXA34_21200 | Not Available | Positive | 4522246 - 4522454 | 7745.58 |
| glycyl-radical enzyme activating protein | DXA34_21205 | Not Available | Negative | 4522423 - 4523316 | 33553.6 |
| hypothetical protein | DXA34_21210 | Not Available | Negative | 4523371 - 4523565 | 7640.51 |
| glycyl radical protein | DXA34_21215 | Not Available | Positive | 4523646 - 4526069 | 91399.4 |
| fructose-6-phosphate aldolase | DXA34_21220 | Not Available | Positive | 4526112 - 4526789 | 24891.0 |
| rok family protein | DXA34_21225 | Not Available | Positive | 4526820 - 4527725 | 33066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
