Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate dehydrogenase | DXA34_21130 | Not Available | Negative | 4507658 - 4508608 | 33811.0 |
| trap transporter permease | DXA34_21135 | Not Available | Negative | 4508750 - 4510702 | 69943.3 |
| hypothetical protein | DXA34_21140 | Not Available | Negative | 4510761 - 4511831 | 37088.8 |
| lysr family transcriptional regulator | DXA34_21145 | Not Available | Negative | 4512045 - 4512959 | 35010.6 |
| d-2-hydroxyacid dehydrogenase | DXA34_21150 | Not Available | Negative | 4513022 - 4513987 | 34840.8 |
| gntr family transcriptional regulator | DXA34_21155 | Not Available | Negative | 4514009 - 4514689 | 26213.7 |
| trap transporter large permease | DXA34_21160 | Not Available | Negative | 4514796 - 4516067 | 44895.9 |
| trap transporter small permease | DXA34_21165 | Not Available | Negative | 4516064 - 4516588 | 19758.9 |
| trap transporter substrate-binding protein | DXA34_21170 | Not Available | Negative | 4516614 - 4517696 | 39436.6 |
| duf126 domain-containing protein | DXA34_21175 | Not Available | Negative | 4517753 - 4518154 | 14676.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
