Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_20955 | Not Available | Negative | 4479381 - 4479698 | 11959.7 |
| hypothetical protein | DXA34_20965 | Not Available | Positive | 4480325 - 4480828 | 19658.4 |
| hypothetical protein | DXA34_20975 | Not Available | Negative | 4482074 - 4482265 | 7195.96 |
| type ii toxin-antitoxin system yafq family toxin | DXA34_20980 | Not Available | Negative | 4482404 - 4482685 | 10821.2 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | DXA34_20985 | Not Available | Negative | 4482682 - 4482960 | 10510.9 |
| crp/fnr family transcriptional regulator | DXA34_20990 | Not Available | Negative | 4483402 - 4484049 | 23787.0 |
| 4fe-4s dicluster domain-containing protein | DXA34_20995 | Not Available | Positive | 4484141 - 4484851 | 25675.1 |
| cupin domain-containing protein | DXA34_21000 | Not Available | Positive | 4484865 - 4485197 | 12003.5 |
| hydroxylamine reductase | DXA34_21010 | Not Available | Positive | 4485501 - 4487141 | 59875.2 |
| hypothetical protein | DXA34_21020 | Not Available | Negative | 4488486 - 4488839 | 13629.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
