Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | DXA34_20905 | Not Available | Positive | 4467416 - 4467871 | 17377.9 |
| hypothetical protein | DXA34_20910 | Not Available | Positive | 4467896 - 4468417 | 18720.4 |
| duf885 domain-containing protein | DXA34_20915 | Not Available | Negative | 4468483 - 4470354 | 70913.5 |
| aaa family atpase | DXA34_20920 | Not Available | Negative | 4471016 - 4472839 | 68941.5 |
| tryptophan synthase subunit beta | DXA34_20925 | Not Available | Positive | 4473192 - 4474409 | 44749.7 |
| hypothetical protein | DXA34_20930 | Not Available | Positive | 4474790 - 4475941 | 42370.9 |
| tripartite tricarboxylate transporter substrate binding protein | DXA34_20935 | Not Available | Positive | 4475981 - 4477039 | 38202.0 |
| tripartite tricarboxylate transporter tctb family protein | DXA34_20940 | Not Available | Positive | 4477066 - 4477530 | 17198.1 |
| tat pathway signal protein | DXA34_20945 | Not Available | Positive | 4477546 - 4479045 | 52923.9 |
| transcriptional regulator | DXA34_20950 | Not Available | Negative | 4479160 - 4479369 | 7746.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
