Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate acyltransferase plsx | DXA34_20595 | Not Available | Positive | 4403063 - 4404082 | 36515.5 |
| acyl carrier protein | DXA34_20600 | Not Available | Positive | 4404099 - 4404329 | 8588.11 |
| ribonuclease iii | DXA34_20605 | Not Available | Positive | 4404428 - 4405114 | 25711.9 |
| chromosome segregation protein smc | DXA34_20610 | Not Available | Positive | 4405122 - 4408682 | 134818.0 |
| signal recognition particle-docking protein ftsy | DXA34_20615 | Not Available | Positive | 4408799 - 4409743 | 34265.0 |
| threonine ammonia-lyase | DXA34_20620 | Not Available | Positive | 4409779 - 4411029 | 45056.8 |
| chloride channel protein | DXA34_20625 | Not Available | Positive | 4411116 - 4412420 | 47030.4 |
| amidohydrolase | DXA34_20630 | Not Available | Positive | 4412462 - 4413778 | 48269.3 |
| is110 family transposase | DXA34_20635 | Not Available | Negative | 4414063 - 4414439 | 14158.0 |
| trap transporter small permease | DXA34_20640 | Not Available | Positive | 4414921 - 4415415 | 17953.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
