Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2813 domain-containing protein | DXA34_20540 | Not Available | Negative | 4390141 - 4391817 | 64896.8 |
| plasmid mobilization relaxosome protein mobc | DXA34_20545 | Not Available | Negative | 4392026 - 4392367 | 13042.0 |
| duf4316 domain-containing protein | DXA34_20550 | Not Available | Negative | 4392367 - 4392546 | 6976.44 |
| hypothetical protein | DXA34_20555 | Not Available | Negative | 4392558 - 4393169 | 23670.8 |
| hypothetical protein | DXA34_20560 | Not Available | Negative | 4393317 - 4393697 | 14552.8 |
| duf4366 domain-containing protein | DXA34_20565 | Not Available | Negative | 4393864 - 4394505 | 23620.0 |
| duf4315 family protein | DXA34_20570 | Not Available | Negative | 4394495 - 4394758 | 9609.37 |
| diguanylate cyclase | DXA34_20580 | Not Available | Positive | 4395890 - 4396885 | 38103.1 |
| dead/deah box helicase | DXA34_20585 | Not Available | Positive | 4396901 - 4401049 | 157011.0 |
| sodium/glutamate symporter | DXA34_20590 | Not Available | Negative | 4401179 - 4402420 | 44510.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
