Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXA34_20490 | Not Available | Negative | 4382070 - 4382768 | 25625.8 |
| abc transporter permease | DXA34_20495 | Not Available | Negative | 4382765 - 4383448 | 25222.4 |
| abc transporter atp-binding protein | DXA34_20500 | Not Available | Negative | 4383445 - 4384290 | 31712.0 |
| tetr/acrr family transcriptional regulator | DXA34_20505 | Not Available | Negative | 4384395 - 4384976 | 22105.3 |
| alpha/beta hydrolase | DXA34_20510 | Not Available | Negative | 4385055 - 4385912 | 32238.1 |
| xre family transcriptional regulator | DXA34_20515 | Not Available | Positive | 4386081 - 4386434 | 13303.9 |
| hypothetical protein | DXA34_20520 | Not Available | Negative | 4386447 - 4386635 | 6706.0 |
| hypothetical protein | DXA34_20525 | Not Available | Negative | 4386639 - 4388063 | 53561.7 |
| hypothetical protein | DXA34_20530 | Not Available | Negative | 4388157 - 4388450 | 10564.6 |
| atp-dependent helicase | DXA34_20535 | Not Available | Negative | 4388642 - 4390144 | 57552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
