Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_01605 | Not Available | Negative | 320277 - 320663 | 13606.3 |
| lysr family transcriptional regulator | DXA34_01610 | Not Available | Negative | 320660 - 321595 | 35072.7 |
| ubid family decarboxylase | DXA34_01615 | Not Available | Negative | 321688 - 323049 | 51092.2 |
| ribose 5-phosphate isomerase b | DXA34_01620 | Not Available | Positive | 323538 - 323981 | 15877.1 |
| hypothetical protein | DXA34_01625 | Not Available | Negative | 324143 - 324544 | 14982.7 |
| duf2089 family protein | DXA34_01630 | Not Available | Negative | 324544 - 324846 | 11554.2 |
| merr family transcriptional regulator | DXA34_01635 | Not Available | Positive | 325043 - 325861 | 31720.4 |
| hypothetical protein | DXA34_01640 | Not Available | Positive | 325872 - 326453 | 22704.7 |
| mate family efflux transporter | DXA34_01645 | Not Available | Positive | 326528 - 327886 | 48944.9 |
| duf4349 domain-containing protein | DXA34_01650 | Not Available | Positive | 328167 - 329177 | 37504.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
