Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_20385 | Not Available | Positive | 4364735 - 4365061 | 11555.5 |
| leucyl aminopeptidase | DXA34_20390 | Not Available | Positive | 4365064 - 4367148 | 79439.5 |
| d-alanyl-d-alanine carboxypeptidase | DXA34_20395 | Not Available | Positive | 4367198 - 4368493 | 47284.5 |
| hydrolase | DXA34_20400 | Not Available | Positive | 4368748 - 4369335 | 21999.4 |
| hypothetical protein | DXA34_20405 | Not Available | Positive | 4369332 - 4370255 | 35935.0 |
| glycosyltransferase | DXA34_20410 | Not Available | Positive | 4370314 - 4371333 | 39612.4 |
| phosphatase pap2 family protein | DXA34_20415 | Not Available | Negative | 4371440 - 4372102 | 25637.7 |
| hypothetical protein | DXA34_20420 | Not Available | Negative | 4372484 - 4372675 | 7768.74 |
| xre family transcriptional regulator | DXA34_20425 | Not Available | Positive | 4372792 - 4372995 | 7855.45 |
| cold-shock protein | DXA34_20430 | Not Available | Negative | 4373054 - 4373254 | 7177.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
