Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease iv | DXA34_20115 | Not Available | Positive | 4310263 - 4311096 | 30996.0 |
| virion core protein | DXA34_20120 | Not Available | Positive | 4311186 - 4312424 | 44606.9 |
| tfiib-type zinc ribbon-containing protein | DXA34_20125 | Not Available | Positive | 4312471 - 4313514 | 40109.0 |
| tpm domain-containing protein | DXA34_20130 | Not Available | Positive | 4313511 - 4314392 | 32549.6 |
| ferrous iron transporter b | DXA34_20135 | Not Available | Negative | 4314397 - 4315239 | 30101.3 |
| recombinase | DXA34_20140 | Not Available | Negative | 4315246 - 4316124 | 33323.3 |
| sigma-70 family rna polymerase sigma factor | DXA34_20145 | Not Available | Negative | 4316265 - 4316642 | 15000.8 |
| abc transporter atp-binding protein | DXA34_20150 | Not Available | Negative | 4317098 - 4318630 | 57694.7 |
| xre family transcriptional regulator | DXA34_20155 | Not Available | Positive | 4319169 - 4319516 | 13336.0 |
| hypothetical protein | DXA34_20160 | Not Available | Positive | 4319609 - 4319794 | 6569.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
