Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DXA34_20060 | Not Available | Positive | 4296428 - 4297240 | 30718.1 |
| bifunctional chorismate mutase/prephenate dehydratase | DXA34_20065 | Not Available | Positive | 4297215 - 4298342 | 42792.1 |
| atp-binding protein | DXA34_20070 | Not Available | Positive | 4298425 - 4299696 | 48533.9 |
| exopolyphosphatase | DXA34_20075 | Not Available | Positive | 4299701 - 4301266 | 59391.0 |
| rna degradosome polyphosphate kinase | DXA34_20080 | Not Available | Positive | 4301270 - 4303438 | 81873.1 |
| dna-binding response regulator | DXA34_20090 | Not Available | Positive | 4304022 - 4304726 | 26633.4 |
| sensor histidine kinase | DXA34_20095 | Not Available | Positive | 4304731 - 4305855 | 42112.5 |
| hypothetical protein | DXA34_20100 | Not Available | Positive | 4305896 - 4308370 | 93610.0 |
| abc transporter atp-binding protein | DXA34_20105 | Not Available | Positive | 4308370 - 4309332 | 35643.5 |
| abc transporter permease | DXA34_20110 | Not Available | Positive | 4309310 - 4310269 | 35719.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
