Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-only hydrogenase system regulator | DXA34_20010 | Not Available | Positive | 4286033 - 4286323 | 10293.5 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DXA34_20015 | Not Available | Positive | 4286323 - 4287420 | 41009.3 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DXA34_20020 | Not Available | Positive | 4287496 - 4288914 | 53736.2 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DXA34_20025 | Not Available | Positive | 4288961 - 4290157 | 43719.9 |
| biotin synthase biob | DXA34_20030 | Not Available | Positive | 4290291 - 4291244 | 35537.4 |
| biotin transporter bioy | DXA34_20035 | Not Available | Positive | 4291267 - 4291842 | 19844.9 |
| cytidylate kinase-like family protein | DXA34_20040 | Not Available | Positive | 4292069 - 4292683 | 23643.4 |
| energy coupling factor transporter s component thiw | DXA34_20045 | Not Available | Negative | 4292771 - 4293355 | 20557.0 |
| phosphomethylpyrimidine synthase thic | DXA34_20050 | Not Available | Negative | 4293414 - 4294721 | 48108.9 |
| hypothetical protein | DXA34_20055 | Not Available | Negative | 4295431 - 4295784 | 13813.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
