Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | DXA34_19905 | Not Available | Negative | 4265880 - 4266887 | 34486.4 |
| dipeptidase pepv | DXA34_19910 | Not Available | Negative | 4267216 - 4268619 | 50841.0 |
| gatb/yqey domain-containing protein | DXA34_19915 | Not Available | Negative | 4268635 - 4269081 | 16380.0 |
| peptide chain release factor 3 | DXA34_19920 | Not Available | Negative | 4269145 - 4270740 | 59776.8 |
| alpha/beta hydrolase | DXA34_19925 | Not Available | Negative | 4270916 - 4271818 | 32576.1 |
| type iii pantothenate kinase | DXA34_19930 | Not Available | Positive | 4272169 - 4272933 | 27071.6 |
| hypothetical protein | DXA34_19935 | Not Available | Negative | 4273144 - 4273701 | 20346.0 |
| sseb family protein | DXA34_19940 | Not Available | Negative | 4273938 - 4274720 | 29957.2 |
| rna polymerase sporulation sigma factor sigg | DXA34_19945 | Not Available | Positive | 4274990 - 4275766 | 29673.6 |
| linear amide c-n hydrolase | DXA34_19950 | Not Available | Positive | 4275959 - 4277062 | 40853.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
