Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DXA34_19490 | Not Available | Positive | 4177148 - 4177747 | 23125.7 |
| duf2871 domain-containing protein | DXA34_19500 | Not Available | Positive | 4178460 - 4178885 | 15827.0 |
| xre family transcriptional regulator | DXA34_19505 | Not Available | Negative | 4178996 - 4179865 | 32331.5 |
| 4fe-4s dicluster domain-containing protein | DXA34_19510 | Not Available | Positive | 4180112 - 4180324 | 7221.09 |
| 4fe-4s binding protein | DXA34_19515 | Not Available | Positive | 4180321 - 4180911 | 22868.4 |
| 3-isopropylmalate dehydrogenase | DXA34_19520 | Not Available | Positive | 4181205 - 4182290 | 39456.6 |
| hypothetical protein | DXA34_19525 | Not Available | Positive | 4182493 - 4182744 | 10128.7 |
| dihydroxy-acid dehydratase | DXA34_19530 | Not Available | Positive | 4182734 - 4184404 | 58996.0 |
| biosynthetic-type acetolactate synthase large subunit | DXA34_19535 | Not Available | Positive | 4184493 - 4186181 | 61494.3 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | DXA34_19540 | Not Available | Positive | 4186227 - 4187387 | 43492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
