Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | DXA34_01490 | Not Available | Positive | 293042 - 294139 | 40276.1 |
| abc transporter permease subunit | DXA34_01495 | Not Available | Positive | 294158 - 295009 | 30873.7 |
| abc transporter permease subunit | DXA34_01500 | Not Available | Positive | 294996 - 295790 | 29429.3 |
| abc transporter atp-binding protein | DXA34_01505 | Not Available | Positive | 295821 - 296825 | 37065.8 |
| php domain-containing protein | DXA34_01510 | Not Available | Positive | 296875 - 297861 | 37298.4 |
| hypothetical protein | DXA34_01520 | Not Available | Negative | 299236 - 299439 | 8018.03 |
| abc-f type ribosomal protection protein | DXA34_01525 | Not Available | Positive | 299660 - 301162 | 57605.2 |
| duf2029 domain-containing protein | DXA34_01530 | Not Available | Positive | 301258 - 302472 | 46460.6 |
| dna-binding response regulator | DXA34_01535 | Not Available | Positive | 302523 - 303194 | 25232.5 |
| sensor histidine kinase | DXA34_01540 | Not Available | Positive | 303210 - 304286 | 41197.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
