Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | DXA34_19180 | Not Available | Positive | 4120006 - 4120857 | 32564.7 |
| eal domain-containing protein | DXA34_19185 | Not Available | Positive | 4121301 - 4122080 | 29005.1 |
| abc transporter permease | DXA34_19190 | Not Available | Negative | 4122088 - 4124682 | 95072.2 |
| abc transporter atp-binding protein | DXA34_19195 | Not Available | Negative | 4124679 - 4125365 | 25393.9 |
| sensor histidine kinase | DXA34_19200 | Not Available | Negative | 4125489 - 4126478 | 36466.5 |
| dna-binding response regulator | DXA34_19205 | Not Available | Negative | 4126468 - 4127151 | 25075.3 |
| polysaccharide pyruvyl transferase family protein | DXA34_19210 | Not Available | Positive | 4127434 - 4128267 | 32245.8 |
| hypothetical protein | DXA34_19215 | Not Available | Positive | 4128285 - 4129691 | 53813.6 |
| hypothetical protein | DXA34_19220 | Not Available | Positive | 4129726 - 4130679 | 37119.7 |
| is256 family transposase | DXA34_19225 | Not Available | Negative | 4131097 - 4132311 | 46657.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
