Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_18955 | Not Available | Negative | 4080488 - 4081528 | 38763.2 |
| hypothetical protein | DXA34_18960 | Not Available | Negative | 4081548 - 4082417 | 32796.1 |
| is30 family transposase | DXA34_18965 | Not Available | Positive | 4082693 - 4084006 | 50815.2 |
| hypothetical protein | DXA34_18970 | Not Available | Negative | 4084251 - 4084460 | 7790.57 |
| mate family efflux transporter | DXA34_18980 | Not Available | Negative | 4084593 - 4085990 | 50786.0 |
| ribonuclease e/g | DXA34_18985 | Not Available | Negative | 4086122 - 4087309 | 44057.2 |
| radical sam protein | DXA34_18990 | Not Available | Negative | 4087353 - 4088102 | 28148.4 |
| tigr03960 family b12-binding radical sam protein | DXA34_18995 | Not Available | Negative | 4088080 - 4089951 | 71525.5 |
| hypothetical protein | DXA34_19000 | Not Available | Negative | 4090166 - 4090414 | 9220.29 |
| hypothetical protein | DXA34_19015 | Not Available | Negative | 4091068 - 4091526 | 18157.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
