Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphate phosphatase | DXA34_01440 | Not Available | Negative | 285723 - 286550 | 30490.3 |
| hypothetical protein | DXA34_01445 | Not Available | Negative | 286714 - 287466 | 28168.6 |
| sigma-70 family rna polymerase sigma factor | DXA34_01450 | Not Available | Negative | 287438 - 287998 | 21611.8 |
| hypothetical protein | DXA34_01455 | Not Available | Negative | 287943 - 288251 | 11091.6 |
| chromate transporter | DXA34_01460 | Not Available | Negative | 288421 - 288972 | 19497.7 |
| chromate transporter | DXA34_01465 | Not Available | Negative | 288969 - 289595 | 22556.2 |
| lysr family transcriptional regulator | DXA34_01470 | Not Available | Positive | 289911 - 290780 | 31674.6 |
| php domain-containing protein | DXA34_01475 | Not Available | Positive | 290970 - 291827 | 32373.1 |
| transcriptional regulator | DXA34_01480 | Not Available | Positive | 291887 - 292243 | 13477.8 |
| pyridoxamine 5'-phosphate oxidase | DXA34_01485 | Not Available | Positive | 292368 - 292787 | 16178.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
