Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DXA34_18805 | Not Available | Negative | 4045572 - 4046555 | 37689.1 |
| conjugal transfer protein | DXA34_18810 | Not Available | Negative | 4046572 - 4046757 | 7249.22 |
| xre family transcriptional regulator | DXA34_18815 | Not Available | Positive | 4047145 - 4047501 | 13407.8 |
| plasmid mobilization relaxosome protein mobc | DXA34_18820 | Not Available | Positive | 4047703 - 4048032 | 13080.9 |
| endonuclease | DXA34_18825 | Not Available | Positive | 4047993 - 4049327 | 51019.0 |
| hypothetical protein | DXA34_18830 | Not Available | Negative | 4049529 - 4049738 | 7967.27 |
| duf4316 domain-containing protein | DXA34_18835 | Not Available | Negative | 4049743 - 4053093 | 126974.0 |
| conjugal transfer protein | DXA34_18840 | Not Available | Negative | 4053219 - 4053587 | 13821.7 |
| type ia dna topoisomerase | DXA34_18845 | Not Available | Negative | 4053584 - 4055659 | 76386.4 |
| duf4366 domain-containing protein | DXA34_18850 | Not Available | Negative | 4055656 - 4056387 | 25963.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
