Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna/rna nuclease sfsa | DXA34_18755 | Not Available | Positive | 4037666 - 4038505 | 31147.8 |
| ferrous iron transport protein a | DXA34_18760 | Not Available | Positive | 4038614 - 4038850 | 8664.5 |
| ferrous iron transporter b | DXA34_18765 | Not Available | Positive | 4038847 - 4040139 | 47133.0 |
| sel1 repeat family protein | DXA34_18770 | Not Available | Negative | 4040136 - 4041635 | 56238.1 |
| recombinase | DXA34_18775 | Not Available | Positive | 4041853 - 4042059 | 7593.98 |
| duf4368 domain-containing protein | DXA34_18780 | Not Available | Negative | 4042052 - 4043725 | 65133.5 |
| hypothetical protein | DXA34_18785 | Not Available | Negative | 4043803 - 4043976 | 6422.94 |
| hypothetical protein | DXA34_18790 | Not Available | Positive | 4044226 - 4044447 | 8132.9 |
| helix-turn-helix domain-containing protein | DXA34_18795 | Not Available | Negative | 4044435 - 4044677 | 9010.94 |
| sigma-70 family rna polymerase sigma factor | DXA34_18800 | Not Available | Negative | 4044661 - 4045098 | 16753.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
