Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | DXA34_18690 | Not Available | Negative | 4018487 - 4020688 | 83346.0 |
| preprotein translocase subunit secg | DXA34_18695 | Not Available | Negative | 4020927 - 4021163 | 8618.98 |
| hypothetical protein | DXA34_18700 | Not Available | Negative | 4021295 - 4022437 | 41760.2 |
| hypothetical protein | DXA34_18705 | Not Available | Negative | 4022460 - 4023860 | 49714.0 |
| 3-phosphoglycerate dehydrogenase | DXA34_18710 | Not Available | Negative | 4023885 - 4024850 | 35774.5 |
| 4-hydroxy-2-oxovalerate aldolase | DXA34_18715 | Not Available | Negative | 4024852 - 4025865 | 36685.3 |
| phosphopyruvate hydratase | DXA34_18720 | Not Available | Negative | 4026121 - 4027389 | 45774.5 |
| phenylalanine--trna ligase subunit beta | DXA34_18730 | Not Available | Negative | 4032549 - 4034969 | 89292.9 |
| phenylalanine--trna ligase subunit alpha | DXA34_18735 | Not Available | Negative | 4035149 - 4036168 | 38489.3 |
| hypothetical protein | DXA34_18740 | Not Available | Positive | 4036334 - 4036516 | 6530.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
