Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase | DXA34_18540 | Not Available | Positive | 3990776 - 3991057 | 10342.4 |
| carbon-nitrogen hydrolase family protein | DXA34_18545 | Not Available | Positive | 3991328 - 3992140 | 30240.5 |
| amino acid permease | DXA34_18550 | Not Available | Positive | 3992158 - 3993399 | 44555.8 |
| lysr family transcriptional regulator | DXA34_18555 | Not Available | Positive | 3993619 - 3994644 | 38530.6 |
| radical sam protein | DXA34_18560 | Not Available | Positive | 3994635 - 3995522 | 33610.6 |
| duf3783 domain-containing protein | DXA34_18565 | Not Available | Positive | 3995549 - 3995962 | 15364.3 |
| polyphosphate:amp phosphotransferase | DXA34_18570 | Not Available | Positive | 3995991 - 3997502 | 59331.6 |
| nad(p)/fad-dependent oxidoreductase | DXA34_18575 | Not Available | Positive | 3997566 - 3998807 | 44720.0 |
| (d)cmp kinase | DXA34_18580 | Not Available | Positive | 3998958 - 3999644 | 25095.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DXA34_18585 | Not Available | Positive | 3999646 - 4000497 | 31920.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
