Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent transcriptional regulator | DXA34_18490 | Not Available | Negative | 3980623 - 3981006 | 14376.1 |
| atp-binding cassette domain-containing protein | DXA34_18495 | Not Available | Negative | 3980996 - 3982498 | 56428.0 |
| energy-coupling factor transporter transmembrane protein ecft | DXA34_18500 | Not Available | Negative | 3982511 - 3983242 | 27222.2 |
| trep_strep domain-containing protein | DXA34_18505 | Not Available | Negative | 3983242 - 3983829 | 21667.6 |
| tetr/acrr family transcriptional regulator | DXA34_18510 | Not Available | Negative | 3983967 - 3984584 | 23690.1 |
| abc transporter atp-binding protein | DXA34_18515 | Not Available | Positive | 3984730 - 3986499 | 65111.4 |
| abc transporter atp-binding protein | DXA34_18520 | Not Available | Positive | 3986492 - 3988216 | 64156.0 |
| tnpv protein | DXA34_18525 | Not Available | Negative | 3988289 - 3988642 | 13712.7 |
| duf4368 domain-containing protein | DXA34_18530 | Not Available | Negative | 3988669 - 3990549 | 72116.9 |
| conjugal transfer protein trag | DXA34_18535 | Not Available | Negative | 3990623 - 3990775 | 5753.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
