Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DXA34_18435 | Not Available | Negative | 3973238 - 3974101 | 32881.5 |
| hypothetical protein | DXA34_18445 | Not Available | Negative | 3974965 - 3975363 | 15072.4 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | DXA34_18450 | Not Available | Positive | 3975627 - 3975905 | 10162.2 |
| type ii toxin-antitoxin system yafq family toxin | DXA34_18455 | Not Available | Positive | 3975902 - 3976192 | 11168.6 |
| conjugal transfer protein traa | DXA34_18460 | Not Available | Negative | 3976299 - 3977744 | 55364.8 |
| duf3847 domain-containing protein | DXA34_18465 | Not Available | Negative | 3977932 - 3978228 | 11036.4 |
| sigma-70 family rna polymerase sigma factor | DXA34_18470 | Not Available | Negative | 3978168 - 3978707 | 20594.6 |
| sigma-70 family rna polymerase sigma factor | DXA34_18475 | Not Available | Negative | 3978704 - 3979165 | 17782.3 |
| rna polymerase subunit sigma-24 | DXA34_18480 | Not Available | Negative | 3979176 - 3979628 | 17886.1 |
| sigma-70 family rna polymerase sigma factor | DXA34_18485 | Not Available | Negative | 3979732 - 3980145 | 15950.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
