Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3847 domain-containing protein | DXA34_18375 | Not Available | Negative | 3967622 - 3967918 | 11748.4 |
| deor family transcriptional regulator | DXA34_18380 | Not Available | Negative | 3967911 - 3968252 | 12387.4 |
| hypothetical protein | DXA34_18385 | Not Available | Negative | 3968249 - 3968437 | 7502.14 |
| hypothetical protein | DXA34_18390 | Not Available | Negative | 3968740 - 3968922 | 7124.88 |
| xre family transcriptional regulator | DXA34_18395 | Not Available | Positive | 3968921 - 3969727 | 30916.1 |
| hypothetical protein | DXA34_18400 | Not Available | Negative | 3969824 - 3970480 | 24506.7 |
| tnpv protein | DXA34_18405 | Not Available | Negative | 3970527 - 3970904 | 14830.8 |
| xre family transcriptional regulator | DXA34_18410 | Not Available | Negative | 3970864 - 3971136 | 10378.6 |
| hypothetical protein | DXA34_18415 | Not Available | Negative | 3971317 - 3971475 | 5413.62 |
| hypothetical protein | DXA34_18425 | Not Available | Negative | 3972566 - 3972931 | 14368.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
