Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_18325 | Not Available | Negative | 3957431 - 3958561 | 42558.5 |
| murr/rpir family transcriptional regulator | DXA34_18330 | Not Available | Negative | 3958587 - 3959468 | 32397.9 |
| rok family protein | DXA34_18335 | Not Available | Negative | 3959503 - 3960405 | 32167.7 |
| n-acetylmannosamine-6-phosphate 2-epimerase | DXA34_18340 | Not Available | Negative | 3960466 - 3961155 | 24958.4 |
| lipolytic enzyme, g-d-s-l | DXA34_18345 | Not Available | Positive | 3961414 - 3962061 | 23886.4 |
| aspartate--trna ligase | DXA34_18350 | Not Available | Negative | 3962204 - 3964000 | 67307.0 |
| histidine--trna ligase | DXA34_18355 | Not Available | Negative | 3964109 - 3965368 | 46441.9 |
| conjugal transfer protein | DXA34_18360 | Not Available | Negative | 3965568 - 3966794 | 47621.7 |
| hypothetical protein | DXA34_18365 | Not Available | Negative | 3966979 - 3967323 | 12487.3 |
| hypothetical protein | DXA34_18370 | Not Available | Positive | 3967228 - 3967515 | 11012.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
