Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DXA34_18270 | Not Available | Negative | 3946397 - 3947074 | 25709.2 |
| large conductance mechanosensitive channel protein mscl | DXA34_18280 | Not Available | Negative | 3947922 - 3948392 | 16419.3 |
| trap transporter large permease | DXA34_18285 | Not Available | Negative | 3948668 - 3949942 | 45090.2 |
| trap transporter small permease | DXA34_18290 | Not Available | Negative | 3949939 - 3950466 | 20042.1 |
| trap transporter substrate-binding protein | DXA34_18295 | Not Available | Negative | 3950490 - 3951569 | 39295.5 |
| n-acetylneuraminate lyase | DXA34_18300 | Not Available | Negative | 3952003 - 3952917 | 33432.4 |
| 3-phosphoglycerate dehydrogenase | DXA34_18305 | Not Available | Negative | 3952910 - 3953890 | 35592.5 |
| extracellular solute-binding protein | DXA34_18310 | Not Available | Negative | 3953922 - 3955289 | 50443.3 |
| carbohydrate abc transporter permease | DXA34_18315 | Not Available | Negative | 3955376 - 3956203 | 30503.6 |
| sugar abc transporter permease | DXA34_18320 | Not Available | Negative | 3956218 - 3957102 | 32926.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
