Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | DXA34_18165 | Not Available | Negative | 3919577 - 3920620 | 37178.4 |
| uroporphyrinogen decarboxylase | DXA34_18170 | Not Available | Positive | 3921155 - 3922153 | 37410.2 |
| lysr family transcriptional regulator | DXA34_18180 | Not Available | Negative | 3922981 - 3923946 | 36493.5 |
| serine dehydratase subunit alpha family protein | DXA34_18185 | Not Available | Positive | 3924256 - 3925527 | 44708.8 |
| yfcc family protein | DXA34_18190 | Not Available | Positive | 3925905 - 3927314 | 50224.9 |
| m20 family peptidase | DXA34_18195 | Not Available | Positive | 3927357 - 3928514 | 42281.5 |
| abgt family transporter | DXA34_18200 | Not Available | Negative | 3928551 - 3930089 | 54440.3 |
| lysr family transcriptional regulator | DXA34_18205 | Not Available | Positive | 3930243 - 3931193 | 35833.1 |
| aminopeptidase p family protein | DXA34_18210 | Not Available | Negative | 3931190 - 3932398 | 44922.1 |
| hypothetical protein | DXA34_18215 | Not Available | Negative | 3932408 - 3933457 | 39561.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
