Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | DXA34_18065 | Not Available | Positive | 3889378 - 3889932 | 21045.5 |
| isoprenyl transferase | DXA34_18070 | Not Available | Positive | 3890038 - 3890778 | 28113.8 |
| phosphatidate cytidylyltransferase | DXA34_18075 | Not Available | Positive | 3890881 - 3891681 | 28775.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DXA34_18080 | Not Available | Positive | 3891819 - 3892961 | 41899.9 |
| rip metalloprotease rsep | DXA34_18085 | Not Available | Positive | 3892984 - 3894144 | 42620.1 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DXA34_18090 | Not Available | Positive | 3894180 - 3895247 | 37862.9 |
| polc-type dna polymerase iii | DXA34_18095 | Not Available | Positive | 3895285 - 3899820 | 170289.0 |
| duf362 domain-containing protein | DXA34_18100 | Not Available | Negative | 3900043 - 3901149 | 40150.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXA34_18105 | Not Available | Positive | 3901346 - 3902623 | 46811.8 |
| hypothetical protein | DXA34_18110 | Not Available | Positive | 3902926 - 3910206 | 266058.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
