Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DXA34_17960 | Not Available | Positive | 3862196 - 3863092 | 34183.3 |
| atp-dependent dna helicase | DXA34_17965 | Not Available | Negative | 3863089 - 3865497 | 93297.8 |
| hpr family phosphocarrier protein | DXA34_17970 | Not Available | Negative | 3865604 - 3865846 | 8880.73 |
| hypothetical protein | DXA34_17975 | Not Available | Positive | 3866358 - 3868382 | 70041.9 |
| hypothetical protein | DXA34_17980 | Not Available | Negative | 3868525 - 3868908 | 14515.5 |
| diguanylate cyclase | DXA34_17985 | Not Available | Negative | 3868990 - 3871344 | 90807.7 |
| Trna-trp | Not Available | Not Available | Positive | 3871748 - 3871818 | Not Available |
| dna repair protein rada | DXA34_17995 | Not Available | Negative | 3871968 - 3873347 | 49984.9 |
| endosialidase | DXA34_18000 | Not Available | Negative | 3873432 - 3873845 | 15272.0 |
| atp-dependent clp protease atp-binding subunit | DXA34_18005 | Not Available | Negative | 3873911 - 3876385 | 92444.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
