Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 25 | DXA34_17855 | Not Available | Positive | 3837734 - 3838498 | 29554.7 |
| pyruvate, phosphate dikinase | DXA34_17860 | Not Available | Negative | 3838555 - 3841179 | 96744.9 |
| sensor histidine kinase | DXA34_17865 | Not Available | Positive | 3841829 - 3843589 | 66479.0 |
| response regulator | DXA34_17870 | Not Available | Positive | 3843592 - 3844458 | 32749.4 |
| sugar abc transporter substrate-binding protein | DXA34_17875 | Not Available | Positive | 3844584 - 3845627 | 38306.7 |
| pts beta-glucoside transporter subunit iic | DXA34_17880 | Not Available | Positive | 3845703 - 3846830 | 40187.2 |
| cyclase family protein | DXA34_17885 | Not Available | Positive | 3846894 - 3847598 | 25484.3 |
| glycine--trna ligase | DXA34_17890 | Not Available | Negative | 3848031 - 3849419 | 53622.2 |
| hypothetical protein | DXA34_17895 | Not Available | Negative | 3849440 - 3850102 | 23019.0 |
| dna repair protein reco | DXA34_17900 | Not Available | Negative | 3850283 - 3850930 | 24954.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
