Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | DXA34_01340 | Not Available | Positive | 267298 - 267447 | 5602.76 |
| hypothetical protein | DXA34_01345 | Not Available | Positive | 267374 - 267721 | 13409.6 |
| peptidase | DXA34_01350 | Not Available | Positive | 267754 - 268770 | 39309.2 |
| o-acetyl-adp-ribose deacetylase | DXA34_01355 | Not Available | Positive | 268824 - 269333 | 18470.0 |
| cysteine methyltransferase | DXA34_01360 | Not Available | Positive | 269352 - 269708 | 13391.2 |
| ngofvii family restriction endonuclease | DXA34_01365 | Not Available | Positive | 269737 - 271065 | 52880.8 |
| marr family transcriptional regulator | DXA34_01370 | Not Available | Positive | 271271 - 271762 | 18593.5 |
| fusc family protein | DXA34_01375 | Not Available | Positive | 271829 - 272887 | 38190.5 |
| cpbp family intramembrane metalloprotease | DXA34_01380 | Not Available | Positive | 273019 - 273801 | 28505.5 |
| amino acid abc transporter substrate-binding protein | DXA34_01385 | Not Available | Positive | 274318 - 275283 | 34724.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
