Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lyxose/d-mannose family sugar isomerase | DXA34_17755 | Not Available | Positive | 3813767 - 3814453 | 26407.1 |
| duf4432 family protein | DXA34_17760 | Not Available | Positive | 3814473 - 3815552 | 40189.1 |
| carbohydrate kinase | DXA34_17765 | Not Available | Positive | 3815540 - 3816505 | 33803.3 |
| dna-binding response regulator | DXA34_17770 | Not Available | Positive | 3816629 - 3818218 | 60302.7 |
| sensor histidine kinase | DXA34_17775 | Not Available | Positive | 3818257 - 3819306 | 39730.3 |
| sugar abc transporter atp-binding protein | DXA34_17780 | Not Available | Positive | 3819303 - 3820796 | 58201.8 |
| vtc domain-containing protein | DXA34_17785 | Not Available | Positive | 3821033 - 3821740 | 27017.4 |
| duf4956 domain-containing protein | DXA34_17790 | Not Available | Positive | 3821737 - 3822411 | 24867.6 |
| hypothetical protein | DXA34_17795 | Not Available | Positive | 3822466 - 3824052 | 61620.6 |
| glycosyltransferase | DXA34_17800 | Not Available | Positive | 3824056 - 3826347 | 87745.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
