Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf521 domain-containing protein | DXA34_17500 | Not Available | Positive | 3753463 - 3754389 | 33994.9 |
| duf126 domain-containing protein | DXA34_17505 | Not Available | Positive | 3754389 - 3754796 | 14499.7 |
| trap transporter substrate-binding protein | DXA34_17510 | Not Available | Positive | 3754856 - 3755956 | 40216.4 |
| trap transporter small permease | DXA34_17515 | Not Available | Positive | 3755990 - 3756502 | 19417.0 |
| trap transporter large permease | DXA34_17520 | Not Available | Positive | 3756499 - 3757776 | 45109.3 |
| duf2088 domain-containing protein | DXA34_17525 | Not Available | Positive | 3757815 - 3759044 | 45018.8 |
| integrase | DXA34_17530 | Not Available | Positive | 3759236 - 3760078 | 32832.2 |
| hypothetical protein | DXA34_17535 | Not Available | Positive | 3760556 - 3761287 | 27696.9 |
| polysaccharide export protein | DXA34_17540 | Not Available | Positive | 3761398 - 3762219 | 30134.7 |
| tyrosine protein kinase | DXA34_17545 | Not Available | Positive | 3762219 - 3762992 | 28764.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
