Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | DXA34_17345 | Not Available | Negative | 3720101 - 3721123 | 36532.5 |
| sdr family oxidoreductase | DXA34_17350 | Not Available | Negative | 3721175 - 3722023 | 29621.5 |
| trap transporter large permease | DXA34_17355 | Not Available | Negative | 3722114 - 3723388 | 45175.1 |
| trap transporter small permease | DXA34_17360 | Not Available | Negative | 3723382 - 3723882 | 18480.1 |
| trap transporter substrate-binding protein | DXA34_17365 | Not Available | Negative | 3723908 - 3724969 | 38026.3 |
| bmp family abc transporter substrate-binding protein | DXA34_17370 | Not Available | Positive | 3725200 - 3727140 | 72958.1 |
| metallophosphoesterase | DXA34_17375 | Not Available | Positive | 3727140 - 3727745 | 23098.5 |
| hypothetical protein | DXA34_17380 | Not Available | Negative | 3728016 - 3728657 | 22556.0 |
| 4-alpha-glucanotransferase | DXA34_17385 | Not Available | Negative | 3728747 - 3730258 | 58443.0 |
| noncanonical pyrimidine nucleotidase, yjjg family | DXA34_17390 | Not Available | Negative | 3730281 - 3730967 | 26321.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
