Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | DXA34_17290 | Not Available | Negative | 3707968 - 3709485 | 55847.1 |
| laci family transcriptional regulator | DXA34_17295 | Not Available | Negative | 3709618 - 3710694 | 38896.3 |
| sensor histidine kinase | DXA34_17305 | Not Available | Negative | 3711864 - 3713459 | 60090.6 |
| dna-binding response regulator | DXA34_17310 | Not Available | Negative | 3713449 - 3714567 | 42784.4 |
| dmt family transporter | DXA34_17315 | Not Available | Negative | 3714817 - 3715707 | 31759.9 |
| ornithine cyclodeaminase | DXA34_17320 | Not Available | Negative | 3715872 - 3716993 | 41685.3 |
| sodium:glutamate symporter | DXA34_17325 | Not Available | Negative | 3717041 - 3718414 | 49293.3 |
| hypothetical protein | DXA34_17330 | Not Available | Negative | 3718533 - 3718715 | 6739.14 |
| xre family transcriptional regulator | DXA34_17335 | Not Available | Positive | 3718939 - 3719286 | 13129.9 |
| had family phosphatase | DXA34_17340 | Not Available | Negative | 3719430 - 3720104 | 24691.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
