Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DXA34_17240 | Not Available | Negative | 3694351 - 3696537 | 81730.7 |
| transketolase family protein | DXA34_17245 | Not Available | Negative | 3697234 - 3698184 | 33858.7 |
| transketolase | DXA34_17250 | Not Available | Negative | 3698174 - 3699031 | 30897.7 |
| fructose-6-phosphate aldolase | DXA34_17255 | Not Available | Negative | 3699050 - 3699706 | 23731.7 |
| l-ribulose-5-phosphate 4-epimerase | DXA34_17260 | Not Available | Negative | 3699847 - 3700545 | 26058.0 |
| atpase | DXA34_17265 | Not Available | Negative | 3700765 - 3702369 | 58505.1 |
| l-arabinose isomerase | DXA34_17270 | Not Available | Negative | 3702451 - 3703956 | 56603.4 |
| fucose isomerase | DXA34_17275 | Not Available | Negative | 3704363 - 3705841 | 54580.4 |
| sugar abc transporter permease yjff | DXA34_17280 | Not Available | Negative | 3705895 - 3706908 | 36467.7 |
| abc transporter permease | DXA34_17285 | Not Available | Negative | 3706908 - 3707966 | 37122.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
