Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | DXA34_17190 | Not Available | Negative | 3680474 - 3681514 | 36714.7 |
| deor/glpr transcriptional regulator | DXA34_17195 | Not Available | Negative | 3681904 - 3682668 | 28276.1 |
| cation-translocating p-type atpase | DXA34_17200 | Not Available | Negative | 3682984 - 3685470 | 89495.8 |
| abc transporter permease | DXA34_17205 | Not Available | Negative | 3685762 - 3687126 | 49407.9 |
| hypothetical protein | DXA34_17210 | Not Available | Negative | 3687123 - 3689486 | 85164.8 |
| abc transporter atp-binding protein | DXA34_17215 | Not Available | Negative | 3689527 - 3690225 | 26137.0 |
| duf3298 domain-containing protein | DXA34_17220 | Not Available | Negative | 3690483 - 3691232 | 27664.3 |
| sigma-70 family rna polymerase sigma factor | DXA34_17225 | Not Available | Negative | 3691445 - 3691969 | 20686.9 |
| carbonic anhydrase | DXA34_17230 | Not Available | Positive | 3692150 - 3692692 | 19883.2 |
| citrate transporter | DXA34_17235 | Not Available | Negative | 3692830 - 3694167 | 47416.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
