Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter substrate-binding protein | DXA34_17035 | Not Available | Negative | 3642194 - 3643225 | 37941.7 |
| duf2848 domain-containing protein | DXA34_17040 | Not Available | Negative | 3643260 - 3643952 | 26232.6 |
| carbon-nitrogen family hydrolase | DXA34_17045 | Not Available | Negative | 3643968 - 3644759 | 29319.1 |
| gntr family transcriptional regulator | DXA34_17050 | Not Available | Negative | 3644973 - 3645632 | 25828.1 |
| ggdef domain-containing protein | DXA34_17055 | Not Available | Negative | 3645690 - 3646760 | 40284.4 |
| transcription-repair coupling factor | DXA34_17060 | Not Available | Negative | 3646981 - 3650520 | 134648.0 |
| aminoacyl-trna hydrolase | DXA34_17065 | Not Available | Negative | 3650566 - 3651174 | 22337.9 |
| nad(p)/fad-dependent oxidoreductase | DXA34_17070 | Not Available | Positive | 3651630 - 3653039 | 52001.7 |
| s41 family peptidase | DXA34_17080 | Not Available | Negative | 3653863 - 3655152 | 46966.4 |
| peptidase m23 | DXA34_17085 | Not Available | Negative | 3655352 - 3656557 | 43908.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
