Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_16980 | Not Available | Negative | 3628296 - 3629552 | 48890.2 |
| hypothetical protein | DXA34_16985 | Not Available | Negative | 3629556 - 3632852 | 127181.0 |
| duf4194 domain-containing protein | DXA34_16990 | Not Available | Negative | 3632849 - 3633493 | 24771.3 |
| chromosome segregation protein smc | DXA34_16995 | Not Available | Negative | 3633494 - 3634918 | 55350.5 |
| is66 family transposase | DXA34_17005 | Not Available | Negative | 3636015 - 3637553 | 59021.5 |
| transposase | DXA34_17010 | Not Available | Negative | 3637639 - 3637998 | 13996.2 |
| is66 family insertion sequence hypothetical protein | DXA34_17015 | Not Available | Negative | 3637988 - 3638332 | 12680.3 |
| tyrosine--trna ligase | DXA34_17020 | Not Available | Negative | 3638634 - 3639869 | 46077.6 |
| trap transporter large permease | DXA34_17025 | Not Available | Negative | 3640383 - 3641651 | 44524.9 |
| trap transporter small permease | DXA34_17030 | Not Available | Negative | 3641653 - 3642141 | 18280.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
