Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-disulfide reductase | DXA34_16920 | Not Available | Negative | 3621365 - 3622276 | 32270.6 |
| thioredoxin | DXA34_16925 | Not Available | Negative | 3622313 - 3622636 | 12123.4 |
| hypothetical protein | DXA34_16930 | Not Available | Negative | 3622918 - 3623625 | 25323.5 |
| hypothetical protein | DXA34_16940 | Not Available | Negative | 3624137 - 3624379 | 9449.06 |
| ester cyclase | DXA34_16945 | Not Available | Negative | 3624870 - 3625280 | 15468.8 |
| gnat family n-acetyltransferase | DXA34_16950 | Not Available | Negative | 3625353 - 3625799 | 16884.5 |
| para family protein | DXA34_16960 | Not Available | Negative | 3626045 - 3626770 | 26460.9 |
| type i toxin-antitoxin system syme family toxin | DXA34_16965 | Not Available | Negative | 3626774 - 3627019 | 9290.32 |
| xre family transcriptional regulator | DXA34_16970 | Not Available | Positive | 3627600 - 3627791 | 7251.06 |
| 23s rrna methyltransferase | DXA34_16975 | Not Available | Negative | 3627857 - 3628273 | 15767.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
